MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Mammaliicoccus sciuri
ACT.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 62
bases: 2,736,455 bps
CDS: 2,710
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,779
Total number of protein coding genes annotated/found:
2,710
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Items 21 - 40
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5014|JADGMB010000016.1
SEQF5014_00021
Genome Viewer
NA
AA
636/212
24687-24052
GTP pyrophosphokinase YjbM
SEQF5014|JADGMB010000016.1
SEQF5014_00022
Genome Viewer
NA
AA
357/119
25049-24693
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00023
Genome Viewer
NA
AA
579/193
25185-25763
Putative triphosphatase YjbK
SEQF5014|JADGMB010000016.1
SEQF5014_00024
Genome Viewer
NA
AA
360/120
25859-26218
Group 2 truncated hemoglobin YjbI
SEQF5014|JADGMB010000016.1
SEQF5014_00025
Genome Viewer
NA
AA
795/265
26239-27033
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00026
Genome Viewer
NA
AA
1806/602
29336-27531
Oligoendopeptidase F%2C plasmid
SEQF5014|JADGMB010000016.1
SEQF5014_00027
Genome Viewer
NA
AA
990/330
30367-29378
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00028
Genome Viewer
NA
AA
690/230
31109-30420
Adapter protein MecA
SEQF5014|JADGMB010000016.1
SEQF5014_00029
Genome Viewer
NA
AA
396/132
31656-31261
Regulatory protein Spx
SEQF5014|JADGMB010000016.1
SEQF5014_00030
Genome Viewer
NA
AA
996/332
31991-32986
Tryptophan--tRNA ligase
SEQF5014|JADGMB010000016.1
SEQF5014_00031
Genome Viewer
NA
AA
1623/541
34984-33362
Oligopeptide-binding protein OppA
SEQF5014|JADGMB010000016.1
SEQF5014_00032
Genome Viewer
NA
AA
1641/547
36669-35029
Dipeptide-binding protein DppE
SEQF5014|JADGMB010000016.1
SEQF5014_00033
Genome Viewer
NA
AA
1656/552
38526-36871
Oligopeptide-binding protein OppA
SEQF5014|JADGMB010000016.1
SEQF5014_00034
Genome Viewer
NA
AA
1671/557
40286-38616
Oligopeptide-binding protein OppA
SEQF5014|JADGMB010000016.1
SEQF5014_00035
Genome Viewer
NA
AA
966/322
41441-40476
Oligopeptide transport ATP-binding protein OppF
SEQF5014|JADGMB010000016.1
SEQF5014_00036
Genome Viewer
NA
AA
1074/358
42514-41441
Oligopeptide transport ATP-binding protein OppD
SEQF5014|JADGMB010000016.1
SEQF5014_00037
Genome Viewer
NA
AA
1071/357
43599-42529
Oligopeptide transport system permease protein OppC
SEQF5014|JADGMB010000016.1
SEQF5014_00038
Genome Viewer
NA
AA
927/309
44525-43599
Oligopeptide transport system permease protein OppB
SEQF5014|JADGMB010000016.1
SEQF5014_00039
Genome Viewer
NA
AA
372/124
44907-45278
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00040
Genome Viewer
NA
AA
1245/415
46589-45345
3-oxoacyl-[acyl-carrier-protein] synthase 2
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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